Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929757.1_cds_XP_016476988.1_68760
CDS Infomation

[gene=LOC107798498] [db_xref=GeneID:107798498] [protein=receptor-like protein kinase HSL1] [protein_id=XP_016476988.1] [location=join(15329..17942,18027..18493)] [gbkey=CDS]
Sequence

ATGATCACCGGAATGTTGACCGGAAAGCAGTCATTTTATCTCATACTGCTACTGAACTTC
ATACCCATTTTGGTAAATTCACAATCTCCGGCCACCACCAATGAAAGTGATATTCTACTG
AAGATAAAGCGTCAATGGGGAGACCCATTATCACTCAGCTCATGGAACTCTACTTCCTCG
CCGTGTGATTGGCCGGAAATTGAGTGTTCTGATGACGGAAAAGTTACCGGAATAATACTT
CAAGAAAAGGACATCACTGTCGAAATTCCGAGTTCCATTTGTGACCTCAAAAATCTTACT
TTTCTCAATCTTGCTTTGAATTTTCTCCCGGGAAAGTTTCCAACTCTTCTATACAACTGT
TCAAGTCTTGAACACTTGGACCTTTCTCAGAATTATTTTGTGGGTCCCATTCCGGCGGAT
ATTCACCTGCTTCAGAAACTCAAGTATCTTGATTTGGGTGGTAACAACTTCACCGGAGAT
ATCCCACCGACGATCGGAAATTTAACGGAGTTGGAGAGCTTGTACTTGCATATGAACTTG
TTTGATGGAACATTTCCGGCAGAAATCGGAAATTTAACCAATCTTGAAAATCTGGGGTTG
GCGTTTAATGGGTTTTCTCCGGCGAGAATACCGCCGGAGTTTGAGAAGCTGAAGAAAATG
AAGTATTTTTGGATGAGACGGGCGAATTTGATTGGCGAAATTCCTGAAAGTTTCGGGAAT
TTTCAAAGTCTTGAGCATATTGATTTGGCTTATAACAATCTTGAAGGAGAAATTCCATCT
GGATTGTTCTGGTTAAAGAATTTGACATATGCTTACTTGTACAGTAATCAGCTTTCGGGT
TTGATTCCTGCGACTAATAAGTTGTCAAATTTGATTGAACTTGATATTTCAAATAACAAG
TTGACTGGGAAAATCCCTGAAAGTTTTGGAGAATTGAAACAGTTGGAGATTCTGAATCTG
TTTTCAAACGAATTATATGGCGAAATTCCACAAAGCATAGCCAAGATTCCAACTTTGAAG
GAATTCAAAGTGTTCAGAAATAAATTGAATGGGAGTTTACCATCTGAAATGGGACTTCAT
TCAACGCTAGAAGCTTTTGAAGTTTCACAGAATTTGTTCACTGGAAATTTGCCTCAGCAT
TTGTGTGCTAAAGGGAATCTCTTTGGTGTGGTAGCTTATGTCAACAATTTATCTGGTGAA
ATACCAAAATCATTAGAAGCTTGTTCCACTTTACGTACGATCCAGCTCTATAAGAATCAG
TTTGTTGGGGAAATTCCATCTGGTGTTTGGACTTTGGTTAATATGACAAGTTTGTTATTG
AGTGATAACTTGTTTTCCGGGGAGTTACCGAGCAAAGTTGCATCCAATTTTACGCGGTTG
GAGATCTATAACAACAAGTTTTCAGGTGAAATTCCAGTGGGAATATCTTCTTGGACTAGT
TTGGTTGTACTTTTGGCGAGTAACAATTCATTCTCGGGGCAGATTCCAGTGGAGTTAACT
AGTCTTTCTAAGCTAACTCGGATGGAGCTTGATGGGAATTTGTTGTCCGGAGAAATTCCG
GCAAATATAACATCATGGAAATCTTTGGCAATTTTGGATCTTGCTAGGAACAAACTCTTT
GGCAAAATTCCAGCAGCTATAGGTTTAATTCCTGATCTTGTTTCTCTAGATTTGTCTCAA
AATCAATTTTCAGGTCCAATTCCACCTCAATTAGGTGTAAAGAGGATAACTAGCCTTAAC
CTATCTTCCAATCAACTTATCGGAAAAATCCCAGATGCATTTGCTAACTTAGCCTTTGAA
AACAGTTTCTTGAACAATCCCAGCCTTTGTACCAGCAACTCACTTCCATATCTTCCAAAT
TGTAATGCCAAAGTCAGCAATTCAAAAAGATTGTCTCATAGAGTTCTAGCCCTGATTCTA
GTCCTTGCAATCGCTGTTTTCCTATTTACTGTCCTATCGACCTTGTTCCTGGTCAGGGAC
TACAAGAGGAAGAAGCATAAGCGCGATGTTGCAAGTTGGAAGTTGACTTCATTCCAGAGG
TTGGATTTCACTGAGGCAAACATTTTGTCAAGTTTGACTGAAAATAACATGATTGGAAGT
GGCGGATCAGGAAAGGTGTACAAAATTTGCATTGGGAGATTGAATGAATACATTGCTGTG
AAGAGGATTTGGAGTGATAGGAAAGTGGATTACAGGCTCGAGAGAGAATTCTTGGCTGAG
GTTCAGATATTGGGATCAATTAGACATTCCAATATAGTCAAGTTATTGTGTTGTATTTCG
AGCGAGGATTCAAAGTTGCTCGTCTATGAGTACATGGTAAATCACAGTCTTGATAGATGG
CTTCATGGAAAGAAGAGAAGTTCATTGAATAATAAAGTCATGGATTGGCCAACAAGATTG
GAGATTGCCATTGGATCTGCTCAAGGACTTTGCTACATGCACCATGATTGCACTCCACCA
ATCCTTCATCGCGATGTGAAATCCAGCAATATCTTATTGGATTCTGAATTCAAGGCAAAA
ATTGCTGATTTTGGCTTGGCTAAGCTCTTAGATAAGAAAGAAGAGCTTCACACCATGTCT
GCTGTTGCTGGTTCATTTGGTTATATTGCTCCAGAGTATGCTTATACAACGAAAGTGAAT
GAGAAGATCGATATCTATAGCTTCGGGGTGGTGCTATTGGAGCTAGTGACAGGAAGACAA
CCAAATTTCGGGGAAGAGCATATGAGCCTAGCAGAATGGGCATGGAAGCAGCACGGAGAA
GGGAACAATGCCATCGATAATATGTTAGATTCAGAGATCAAGGAAGCATGTTACTTGGAA
GAAATGAAAACCGTGTTCAGACTCGGGCTTATATGCACGAGCAACTTACCTTCAAGTAGG
CCTACCATGAAAGAGGTTTTGCAGATACTTCATCGATGCAAGAACTTCAGGAATTCCGCT
GGAAAATCACCAGATAAAGAGTATGATGTTGCACCCCTCCTTGGCAACAACAGCGAAAAG
TACATTGCAAGTTACAAGCGTATTAATTCTAATAAGGTAATAGATGATAGTGATGATGGT
CTAATAATCTCCACACTGTAA

Peptide Sequence

PEP ID

XP_016476988.1
PEP Infomation

PREDICTED: receptor-like protein kinase HSL1 [Nicotiana tabacum]
Sequence

MITGMLTGKQSFYLILLLNFIPILVNSQSPATTNESDILLKIKRQWGDPLSLSSWNSTSS
PCDWPEIECSDDGKVTGIILQEKDITVEIPSSICDLKNLTFLNLALNFLPGKFPTLLYNC
SSLEHLDLSQNYFVGPIPADIHLLQKLKYLDLGGNNFTGDIPPTIGNLTELESLYLHMNL
FDGTFPAEIGNLTNLENLGLAFNGFSPARIPPEFEKLKKMKYFWMRRANLIGEIPESFGN
FQSLEHIDLAYNNLEGEIPSGLFWLKNLTYAYLYSNQLSGLIPATNKLSNLIELDISNNK
LTGKIPESFGELKQLEILNLFSNELYGEIPQSIAKIPTLKEFKVFRNKLNGSLPSEMGLH
STLEAFEVSQNLFTGNLPQHLCAKGNLFGVVAYVNNLSGEIPKSLEACSTLRTIQLYKNQ
FVGEIPSGVWTLVNMTSLLLSDNLFSGELPSKVASNFTRLEIYNNKFSGEIPVGISSWTS
LVVLLASNNSFSGQIPVELTSLSKLTRMELDGNLLSGEIPANITSWKSLAILDLARNKLF
GKIPAAIGLIPDLVSLDLSQNQFSGPIPPQLGVKRITSLNLSSNQLIGKIPDAFANLAFE
NSFLNNPSLCTSNSLPYLPNCNAKVSNSKRLSHRVLALILVLAIAVFLFTVLSTLFLVRD
YKRKKHKRDVASWKLTSFQRLDFTEANILSSLTENNMIGSGGSGKVYKICIGRLNEYIAV
KRIWSDRKVDYRLEREFLAEVQILGSIRHSNIVKLLCCISSEDSKLLVYEYMVNHSLDRW
LHGKKRSSLNNKVMDWPTRLEIAIGSAQGLCYMHHDCTPPILHRDVKSSNILLDSEFKAK
IADFGLAKLLDKKEELHTMSAVAGSFGYIAPEYAYTTKVNEKIDIYSFGVVLLELVTGRQ
PNFGEEHMSLAEWAWKQHGEGNNAIDNMLDSEIKEACYLEEMKTVFRLGLICTSNLPSSR
PTMKEVLQILHRCKNFRNSAGKSPDKEYDVAPLLGNNSEKYIASYKRINSNKVIDDSDDG
LIISTL

Transcript Sequence

Gene sequence data has not been registered.